MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Sphingopyxis alaskensis RB2256 F plasmid

Total Repeats: 51

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_008036	AACC	2	8	105	112	50 %	0 %	0 %	50 %	Non-Coding
2	NC_008036	GC	3	6	4737	4742	0 %	0 %	50 %	50 %	Non-Coding
3	NC_008036	AAAG	2	8	5424	5431	75 %	0 %	25 %	0 %	Non-Coding
4	NC_008036	ACG	2	6	5507	5512	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_008036	GCA	2	6	5553	5558	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_008036	CTCAT	2	10	7045	7054	20 %	40 %	0 %	40 %	Non-Coding
7	NC_008036	CCT	2	6	8874	8879	0 %	33.33 %	0 %	66.67 %	Non-Coding
8	NC_008036	GTGC	2	8	8911	8918	0 %	25 %	50 %	25 %	Non-Coding
9	NC_008036	TTC	2	6	8935	8940	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_008036	TCC	2	6	9014	9019	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_008036	CCG	2	6	9055	9060	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_008036	GGA	2	6	11718	11723	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_008036	GAATA	2	10	11754	11763	60 %	20 %	20 %	0 %	Non-Coding
14	NC_008036	GTT	2	6	14643	14648	0 %	66.67 %	33.33 %	0 %	Non-Coding
15	NC_008036	T	6	6	14647	14652	0 %	100 %	0 %	0 %	Non-Coding
16	NC_008036	TTGG	2	8	14734	14741	0 %	50 %	50 %	0 %	Non-Coding
17	NC_008036	CAC	2	6	14750	14755	33.33 %	0 %	0 %	66.67 %	Non-Coding
18	NC_008036	GCG	2	6	14764	14769	0 %	0 %	66.67 %	33.33 %	Non-Coding
19	NC_008036	ATG	2	6	25006	25011	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_008036	CGCA	2	8	25013	25020	25 %	0 %	25 %	50 %	Non-Coding
21	NC_008036	GGCAA	2	10	25089	25098	40 %	0 %	40 %	20 %	Non-Coding
22	NC_008036	TGG	2	6	25129	25134	0 %	33.33 %	66.67 %	0 %	Non-Coding
23	NC_008036	GCA	2	6	25217	25222	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_008036	ACC	2	6	25226	25231	33.33 %	0 %	0 %	66.67 %	Non-Coding
25	NC_008036	ACC	2	6	25268	25273	33.33 %	0 %	0 %	66.67 %	Non-Coding
26	NC_008036	T	6	6	25355	25360	0 %	100 %	0 %	0 %	Non-Coding
27	NC_008036	CCA	2	6	25380	25385	33.33 %	0 %	0 %	66.67 %	Non-Coding
28	NC_008036	AGA	2	6	25427	25432	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_008036	GCAGC	2	10	25483	25492	20 %	0 %	40 %	40 %	Non-Coding
30	NC_008036	G	6	6	25556	25561	0 %	0 %	100 %	0 %	Non-Coding
31	NC_008036	TTC	2	6	25686	25691	0 %	66.67 %	0 %	33.33 %	Non-Coding
32	NC_008036	GCT	2	6	25741	25746	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_008036	CG	3	6	26177	26182	0 %	0 %	50 %	50 %	Non-Coding
34	NC_008036	GC	3	6	26207	26212	0 %	0 %	50 %	50 %	Non-Coding
35	NC_008036	CG	3	6	26240	26245	0 %	0 %	50 %	50 %	Non-Coding
36	NC_008036	CCG	2	6	26246	26251	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_008036	ATTA	2	8	26327	26334	50 %	50 %	0 %	0 %	Non-Coding
38	NC_008036	AT	3	6	26494	26499	50 %	50 %	0 %	0 %	Non-Coding
39	NC_008036	TCC	2	6	26517	26522	0 %	33.33 %	0 %	66.67 %	Non-Coding
40	NC_008036	TAAT	2	8	26559	26566	50 %	50 %	0 %	0 %	Non-Coding
41	NC_008036	TA	3	6	28173	28178	50 %	50 %	0 %	0 %	Non-Coding
42	NC_008036	TGG	2	6	28181	28186	0 %	33.33 %	66.67 %	0 %	Non-Coding
43	NC_008036	GCT	2	6	28297	28302	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
44	NC_008036	GGC	2	6	28315	28320	0 %	0 %	66.67 %	33.33 %	Non-Coding
45	NC_008036	CG	3	6	28326	28331	0 %	0 %	50 %	50 %	Non-Coding
46	NC_008036	ATA	2	6	28356	28361	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_008036	CGA	2	6	28387	28392	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_008036	GAA	2	6	28423	28428	66.67 %	0 %	33.33 %	0 %	Non-Coding
49	NC_008036	ATG	2	6	28460	28465	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
50	NC_008036	ATC	2	6	28472	28477	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_008036	CGA	2	6	28507	28512	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.